deal.II version GIT relicensing-2291-g668cd86249 2024-12-24 11:30:00+00:00
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dof_info.h
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1// ------------------------------------------------------------------------
2//
3// SPDX-License-Identifier: LGPL-2.1-or-later
4// Copyright (C) 2012 - 2023 by the deal.II authors
5//
6// This file is part of the deal.II library.
7//
8// Part of the source code is dual licensed under Apache-2.0 WITH
9// LLVM-exception OR LGPL-2.1-or-later. Detailed license information
10// governing the source code and code contributions can be found in
11// LICENSE.md and CONTRIBUTING.md at the top level directory of deal.II.
12//
13// ------------------------------------------------------------------------
14
15
16#ifndef dealii_matrix_free_dof_info_h
17#define dealii_matrix_free_dof_info_h
18
19
20#include <deal.II/base/config.h>
21
24
27
28#include <array>
29#include <memory>
30
31
33
34#ifndef DOXYGEN
35
36// forward declarations
37
38namespace internal
39{
40 namespace MatrixFreeFunctions
41 {
42 template <int dim>
43 class HangingNodes;
44
45 struct TaskInfo;
46
47 template <typename Number>
48 struct ConstraintValues;
49
50 namespace VectorDataExchange
51 {
52 class Base;
53 }
54 } // namespace MatrixFreeFunctions
55} // namespace internal
56
57template <typename>
59
61
62template <typename>
63class TriaIterator;
64
65template <int, int, bool>
66class DoFCellAccessor;
67
68namespace Utilities
69{
70 namespace MPI
71 {
72 class Partitioner;
73 }
74} // namespace Utilities
75
76#endif
77
78namespace internal
79{
80 namespace MatrixFreeFunctions
81 {
86 using compressed_constraint_kind = std::uint8_t;
87
106 struct DoFInfo
107 {
120 static const unsigned int chunk_size_zero_vector = 64;
121
125 DoFInfo();
126
130 DoFInfo(const DoFInfo &) = default;
131
135 DoFInfo(DoFInfo &&) noexcept = default;
136
140 ~DoFInfo() = default;
141
145 DoFInfo &
146 operator=(const DoFInfo &) = default;
147
151 DoFInfo &
152 operator=(DoFInfo &&) noexcept = default;
153
157 void
158 clear();
159
165 unsigned int
166 fe_index_from_degree(const unsigned int first_selected_component,
167 const unsigned int fe_degree) const;
168
188 void
189 get_dof_indices_on_cell_batch(std::vector<unsigned int> &local_indices,
190 const unsigned int cell_batch,
191 const bool with_constraints = true) const;
192
202 template <typename number>
203 void
205 const std::vector<types::global_dof_index> &local_indices_resolved,
206 const std::vector<types::global_dof_index> &local_indices,
207 const bool cell_has_hanging_nodes,
208 const ::AffineConstraints<number> &constraints,
209 const unsigned int cell_number,
210 ConstraintValues<double> &constraint_values,
211 bool &cell_at_boundary);
212
217 template <int dim>
218 bool
220 const HangingNodes<dim> &hanging_nodes,
221 const std::vector<std::vector<unsigned int>> &lexicographic_mapping,
222 const unsigned int cell_number,
223 const TriaIterator<DoFCellAccessor<dim, dim, false>> &cell,
224 std::vector<types::global_dof_index> &dof_indices);
225
233 void
234 assign_ghosts(const std::vector<unsigned int> &boundary_cells,
235 const MPI_Comm communicator_sm,
236 const bool use_vector_data_exchanger_full);
237
244 void
245 reorder_cells(const TaskInfo &task_info,
246 const std::vector<unsigned int> &renumbering,
247 const std::vector<unsigned int> &constraint_pool_row_index,
248 const std::vector<unsigned char> &irregular_cells);
249
254 void
256 const std::vector<unsigned char> &irregular_cells);
257
262 template <int length>
263 void
265 const std::vector<FaceToCellTopology<length>> &faces,
266 bool hold_all_faces_to_owned_cells);
267
273 void
274 make_connectivity_graph(const TaskInfo &task_info,
275 const std::vector<unsigned int> &renumbering,
276 DynamicSparsityPattern &connectivity) const;
277
283 void
285 const Table<2, ShapeInfo<double>> &shape_info,
286 const unsigned int n_owned_cells,
287 const unsigned int n_lanes,
288 const std::vector<FaceToCellTopology<1>> &inner_faces,
289 const std::vector<FaceToCellTopology<1>> &ghosted_faces,
290 const bool fill_cell_centric,
291 const MPI_Comm communicator_sm,
292 const bool use_vector_data_exchanger_full);
293
299 void
301 std::array<std::vector<std::pair<unsigned int, unsigned int>>, 3>
302 &cell_indices_contiguous_sm);
303
314 void
316 std::vector<types::global_dof_index> &renumbering);
317
327 template <int length>
328 void
330 const TaskInfo &task_info,
331 const std::vector<FaceToCellTopology<length>> &faces);
332
336 std::size_t
337 memory_consumption() const;
338
343 template <typename StreamType>
344 void
346 const TaskInfo &size_info) const;
347
352 template <typename Number>
353 void
354 print(const std::vector<Number> &constraint_pool_data,
355 const std::vector<unsigned int> &constraint_pool_row_index,
356 std::ostream &out) const;
357
451
471
481
489 std::array<std::vector<IndexStorageVariants>, 3> index_storage_variants;
490
497 std::vector<std::pair<unsigned int, unsigned int>> row_starts;
498
514 std::vector<unsigned int> dof_indices;
515
520 std::vector<std::vector<bool>> hanging_node_constraint_masks_comp;
521
526 std::vector<compressed_constraint_kind> hanging_node_constraint_masks;
527
537 std::vector<std::pair<unsigned short, unsigned short>>
539
543 std::vector<unsigned int> dof_indices_interleaved;
544
553 std::array<std::vector<unsigned int>, 3> dof_indices_contiguous;
554
563 std::array<std::vector<std::pair<unsigned int, unsigned int>>, 3>
565
574 std::array<std::vector<unsigned int>, 3> dof_indices_interleave_strides;
575
585 std::array<std::vector<unsigned char>, 3> n_vectorization_lanes_filled;
586
593 std::shared_ptr<const Utilities::MPI::Partitioner> vector_partitioner;
594
598 std::shared_ptr<
601
621 std::array<
622 std::shared_ptr<
624 5>
626
631 std::vector<unsigned int> constrained_dofs;
632
637 std::vector<unsigned int> row_starts_plain_indices;
638
647 std::vector<unsigned int> plain_dof_indices;
648
654
659 unsigned int n_base_elements;
660
665 std::vector<unsigned int> n_components;
666
671 std::vector<unsigned int> start_components;
672
677 std::vector<unsigned int> component_to_base_index;
678
690 std::vector<std::vector<unsigned int>> component_dof_indices_offset;
691
695 std::vector<unsigned int> dofs_per_cell;
696
700 std::vector<unsigned int> dofs_per_face;
701
706
710 std::vector<unsigned int> cell_active_fe_index;
711
716 unsigned int max_fe_index;
717
723 std::vector<std::vector<unsigned int>> fe_index_conversion;
724
730 std::vector<types::global_dof_index> ghost_dofs;
731
737 std::vector<unsigned int> vector_zero_range_list_index;
738
742 std::vector<std::pair<unsigned int, unsigned int>> vector_zero_range_list;
743
749 std::vector<unsigned int> cell_loop_pre_list_index;
750
755 std::vector<std::pair<unsigned int, unsigned int>> cell_loop_pre_list;
756
762 std::vector<unsigned int> cell_loop_post_list_index;
763
768 std::vector<std::pair<unsigned int, unsigned int>> cell_loop_post_list;
769 };
770
771
772 /*-------------------------- Inline functions ---------------------------*/
773
774#ifndef DOXYGEN
775
776
777 inline unsigned int
778 DoFInfo::fe_index_from_degree(const unsigned int first_selected_component,
779 const unsigned int fe_degree) const
780 {
781 const unsigned int n_indices = fe_index_conversion.size();
782 if (n_indices <= 1)
783 return 0;
784 for (unsigned int i = 0; i < n_indices; ++i)
785 if (fe_index_conversion[i][first_selected_component] == fe_degree)
786 return i;
788 }
789
790#endif // ifndef DOXYGEN
791
792 } // end of namespace MatrixFreeFunctions
793} // end of namespace internal
794
796
797#endif
#define DEAL_II_NAMESPACE_OPEN
Definition config.h:498
#define DEAL_II_NAMESPACE_CLOSE
Definition config.h:499
std::uint8_t compressed_constraint_kind
Definition dof_info.h:86
static const unsigned int invalid_unsigned_int
Definition types.h:220
STL namespace.
Definition types.h:32
void print(const std::vector< Number > &constraint_pool_data, const std::vector< unsigned int > &constraint_pool_row_index, std::ostream &out) const
void reorder_cells(const TaskInfo &task_info, const std::vector< unsigned int > &renumbering, const std::vector< unsigned int > &constraint_pool_row_index, const std::vector< unsigned char > &irregular_cells)
Definition dof_info.cc:298
std::vector< std::pair< unsigned short, unsigned short > > constraint_indicator
Definition dof_info.h:538
std::vector< unsigned int > cell_loop_pre_list_index
Definition dof_info.h:749
std::vector< std::pair< unsigned int, unsigned int > > row_starts
Definition dof_info.h:497
std::vector< std::vector< unsigned int > > component_dof_indices_offset
Definition dof_info.h:690
void compute_tight_partitioners(const Table< 2, ShapeInfo< double > > &shape_info, const unsigned int n_owned_cells, const unsigned int n_lanes, const std::vector< FaceToCellTopology< 1 > > &inner_faces, const std::vector< FaceToCellTopology< 1 > > &ghosted_faces, const bool fill_cell_centric, const MPI_Comm communicator_sm, const bool use_vector_data_exchanger_full)
Definition dof_info.cc:895
std::vector< std::vector< bool > > hanging_node_constraint_masks_comp
Definition dof_info.h:520
void get_dof_indices_on_cell_batch(std::vector< unsigned int > &local_indices, const unsigned int cell_batch, const bool with_constraints=true) const
Definition dof_info.cc:82
unsigned int fe_index_from_degree(const unsigned int first_selected_component, const unsigned int fe_degree) const
void compute_cell_index_compression(const std::vector< unsigned char > &irregular_cells)
Definition dof_info.cc:530
std::vector< unsigned int > cell_loop_post_list_index
Definition dof_info.h:762
std::vector< unsigned int > dofs_per_cell
Definition dof_info.h:695
void assign_ghosts(const std::vector< unsigned int > &boundary_cells, const MPI_Comm communicator_sm, const bool use_vector_data_exchanger_full)
Definition dof_info.cc:155
void compute_dof_renumbering(std::vector< types::global_dof_index > &renumbering)
Definition dof_info.cc:1469
static const unsigned int chunk_size_zero_vector
Definition dof_info.h:120
std::shared_ptr< const internal::MatrixFreeFunctions::VectorDataExchange::Base > vector_exchanger
Definition dof_info.h:600
std::vector< std::vector< unsigned int > > fe_index_conversion
Definition dof_info.h:723
std::vector< unsigned int > dof_indices
Definition dof_info.h:514
std::vector< std::pair< unsigned int, unsigned int > > vector_zero_range_list
Definition dof_info.h:742
std::shared_ptr< const Utilities::MPI::Partitioner > vector_partitioner
Definition dof_info.h:593
std::vector< compressed_constraint_kind > hanging_node_constraint_masks
Definition dof_info.h:526
std::array< std::vector< unsigned int >, 3 > dof_indices_interleave_strides
Definition dof_info.h:574
std::array< std::vector< std::pair< unsigned int, unsigned int > >, 3 > dof_indices_contiguous_sm
Definition dof_info.h:564
std::vector< unsigned int > row_starts_plain_indices
Definition dof_info.h:637
std::vector< unsigned int > dofs_per_face
Definition dof_info.h:700
std::vector< unsigned int > component_to_base_index
Definition dof_info.h:677
void compute_vector_zero_access_pattern(const TaskInfo &task_info, const std::vector< FaceToCellTopology< length > > &faces)
std::vector< unsigned int > n_components
Definition dof_info.h:665
void print_memory_consumption(StreamType &out, const TaskInfo &size_info) const
void compute_face_index_compression(const std::vector< FaceToCellTopology< length > > &faces, bool hold_all_faces_to_owned_cells)
std::vector< std::pair< unsigned int, unsigned int > > cell_loop_pre_list
Definition dof_info.h:755
std::vector< types::global_dof_index > ghost_dofs
Definition dof_info.h:730
void read_dof_indices(const std::vector< types::global_dof_index > &local_indices_resolved, const std::vector< types::global_dof_index > &local_indices, const bool cell_has_hanging_nodes, const ::AffineConstraints< number > &constraints, const unsigned int cell_number, ConstraintValues< double > &constraint_values, bool &cell_at_boundary)
std::array< std::vector< unsigned int >, 3 > dof_indices_contiguous
Definition dof_info.h:553
bool process_hanging_node_constraints(const HangingNodes< dim > &hanging_nodes, const std::vector< std::vector< unsigned int > > &lexicographic_mapping, const unsigned int cell_number, const TriaIterator< DoFCellAccessor< dim, dim, false > > &cell, std::vector< types::global_dof_index > &dof_indices)
DoFInfo(const DoFInfo &)=default
std::vector< unsigned int > cell_active_fe_index
Definition dof_info.h:710
std::array< std::shared_ptr< const internal::MatrixFreeFunctions::VectorDataExchange::Base >, 5 > vector_exchanger_face_variants
Definition dof_info.h:625
std::vector< unsigned int > plain_dof_indices
Definition dof_info.h:647
std::array< std::vector< unsigned char >, 3 > n_vectorization_lanes_filled
Definition dof_info.h:585
std::vector< unsigned int > start_components
Definition dof_info.h:671
std::vector< unsigned int > dof_indices_interleaved
Definition dof_info.h:543
std::vector< unsigned int > constrained_dofs
Definition dof_info.h:631
std::array< std::vector< IndexStorageVariants >, 3 > index_storage_variants
Definition dof_info.h:489
void make_connectivity_graph(const TaskInfo &task_info, const std::vector< unsigned int > &renumbering, DynamicSparsityPattern &connectivity) const
Definition dof_info.cc:1392
std::vector< unsigned int > vector_zero_range_list_index
Definition dof_info.h:737
void compute_shared_memory_contiguous_indices(std::array< std::vector< std::pair< unsigned int, unsigned int > >, 3 > &cell_indices_contiguous_sm)
Definition dof_info.cc:1241
std::vector< std::pair< unsigned int, unsigned int > > cell_loop_post_list
Definition dof_info.h:768
DoFInfo(DoFInfo &&) noexcept=default