#include <deal.II/lac/slepc_solver.h>

Inheritance diagram for SLEPcWrappers::SolverJacobiDavidson:

Classes
struct	AdditionalData

Public Member Functions
	SolverJacobiDavidson (SolverControl &cn, const MPI_Comm &mpi_communicator=PETSC_COMM_SELF, const AdditionalData &data=AdditionalData())

template<typename OutputVector >
void	solve (const PETScWrappers::MatrixBase &A, std::vector< PetscScalar > &eigenvalues, std::vector< OutputVector > &eigenvectors, const unsigned int n_eigenpairs=1)

template<typename OutputVector >
void	solve (const PETScWrappers::MatrixBase &A, const PETScWrappers::MatrixBase &B, std::vector< PetscScalar > &eigenvalues, std::vector< OutputVector > &eigenvectors, const unsigned int n_eigenpairs=1)

template<typename OutputVector >
void	solve (const PETScWrappers::MatrixBase &A, const PETScWrappers::MatrixBase &B, std::vector< double > &real_eigenvalues, std::vector< double > &imag_eigenvalues, std::vector< OutputVector > &real_eigenvectors, std::vector< OutputVector > &imag_eigenvectors, const unsigned int n_eigenpairs=1)

template<typename Vector >
void	set_initial_space (const std::vector< Vector > &initial_space)

void	set_transformation (SLEPcWrappers::TransformationBase &this_transformation)

void	set_target_eigenvalue (const PetscScalar &this_target)

void	set_which_eigenpairs (EPSWhich set_which)

void	set_problem_type (EPSProblemType set_problem)

void	get_solver_state (const SolverControl::State state)

SolverControl &	control () const

Static Public Member Functions
static ::ExceptionBase &	ExcSLEPcWrappersUsageError ()

static ::ExceptionBase &	ExcSLEPcError (int arg1)

static ::ExceptionBase &	ExcSLEPcEigenvectorConvergenceMismatchError (int arg1, int arg2)

Protected Member Functions
void	solve (const unsigned int n_eigenpairs, unsigned int *n_converged)

void	get_eigenpair (const unsigned int index, PetscScalar &eigenvalues, PETScWrappers::VectorBase &eigenvectors)

void	get_eigenpair (const unsigned int index, double &real_eigenvalues, double &imag_eigenvalues, PETScWrappers::VectorBase &real_eigenvectors, PETScWrappers::VectorBase &imag_eigenvectors)

void	set_matrices (const PETScWrappers::MatrixBase &A)

void	set_matrices (const PETScWrappers::MatrixBase &A, const PETScWrappers::MatrixBase &B)

Protected Attributes
const AdditionalData	additional_data

SolverControl &	solver_control

const MPI_Comm	mpi_communicator

EPS	eps

Static Private Member Functions
static int	convergence_test (EPS eps, PetscScalar real_eigenvalue, PetscScalar imag_eigenvalue, PetscReal residual_norm, PetscReal estimated_error, void solver_control)

Private Attributes
EPSConvergedReason	reason

Detailed Description

An implementation of the solver interface using the SLEPc Jacobi-Davidson solver. Usage: All problem types.

For examples of how this and its sibling classes can be used, including how to provide preconditioners to the matrix of which eigenvalues are to be computed, see the documentation of the SolverBase class as well as the extensive discussions in the documentation of the SLEPcWrappers namespace.

Definition at line 626 of file slepc_solver.h.

Constructor & Destructor Documentation

◆ SolverJacobiDavidson()

SLEPcWrappers::SolverJacobiDavidson::SolverJacobiDavidson	(	SolverControl &	cn,
		const MPI_Comm &	mpi_communicator = `PETSC_COMM_SELF`,
		const AdditionalData &	data = `AdditionalData()`
	)

SLEPc solvers will want to have an MPI communicator context over which computations are parallelized. By default, this carries the same behavior as the PETScWrappers, but you can change that.

Definition at line 466 of file slepc_solver.cc.

Member Function Documentation

◆ solve() [1/4]

template<typename OutputVector >

void SolverBase< OutputVector >::solve	(	const PETScWrappers::MatrixBase &	A,
		std::vector< PetscScalar > &	eigenvalues,
		std::vector< OutputVector > &	eigenvectors,
		const unsigned int	n_eigenpairs = `1`
	)

inherited

Composite method that solves the eigensystem \(Ax=\lambda x\). The eigenvector sent in has to have at least one element that we can use as a template when resizing, since we do not know the parameters of the specific vector class used (i.e. local_dofs for MPI vectors). However, while copying eigenvectors, at least twice the memory size of eigenvectors is being used (and can be more). To avoid doing this, the fairly standard calling sequence executed here is used: Set up matrices for solving; Actually solve the system; Gather the solution(s).

Note: Note that the number of converged eigenvectors can be larger than the number of eigenvectors requested; this is due to a round off error (success) of the eigenproblem solver context. If this is found to be the case we simply do not bother with more eigenpairs than requested, but handle that it may be more than specified by ignoring any extras. By default one eigenvector/eigenvalue pair is computed.

This is declared here to make it possible to take a std::vector of different PETScWrappers vector types

Definition at line 704 of file slepc_solver.h.

◆ solve() [2/4]

template<typename OutputVector >

void SolverBase< OutputVector >::solve	(	const PETScWrappers::MatrixBase &	A,
		const PETScWrappers::MatrixBase &	B,
		std::vector< PetscScalar > &	eigenvalues,
		std::vector< OutputVector > &	eigenvectors,
		const unsigned int	n_eigenpairs = `1`
	)

inherited

Same as above, but here a composite method for solving the system \(A x=\lambda B x\), for real matrices, vectors, and values \(A, B, x, \lambda\).

Definition at line 736 of file slepc_solver.h.

◆ solve() [3/4]

template<typename OutputVector >

void SolverBase< OutputVector >::solve	(	const PETScWrappers::MatrixBase &	A,
		const PETScWrappers::MatrixBase &	B,
		std::vector< double > &	real_eigenvalues,
		std::vector< double > &	imag_eigenvalues,
		std::vector< OutputVector > &	real_eigenvectors,
		std::vector< OutputVector > &	imag_eigenvectors,
		const unsigned int	n_eigenpairs = `1`
	)

inherited

Same as above, but here a composite method for solving the system \(A x=\lambda B x\) with real matrices \(A, B\) and imaginary eigenpairs \(x, \lambda\).

Definition at line 774 of file slepc_solver.h.

◆ solve() [4/4]

void SolverBase< VectorType >::solve	(	const unsigned int	n_eigenpairs,
		unsigned int *	n_converged
	)

protectedinherited

Solve the linear system for n_eigenpairs eigenstates. Parameter n_converged contains the actual number of eigenstates that have converged; this can be both fewer or more than n_eigenpairs, depending on the SLEPc eigensolver used.

Definition at line 157 of file slepc_solver.cc.

◆ set_initial_space()

template<typename Vector >

void SolverBase< Vector >::set_initial_space ( const std::vector< Vector > & initial_space )

inherited

Set the initial vector space for the solver.

By default, SLEPc initializes the starting vector or the initial subspace randomly.

Definition at line 830 of file slepc_solver.h.

◆ set_transformation()

void SolverBase< VectorType >::set_transformation ( SLEPcWrappers::TransformationBase & this_transformation )

inherited

Set the spectral transformation to be used.

Definition at line 98 of file slepc_solver.cc.

◆ set_target_eigenvalue()

void SolverBase< VectorType >::set_target_eigenvalue ( const PetscScalar & this_target )

inherited

Set target eigenvalues in the spectrum to be computed. By default, no target is set.

Definition at line 126 of file slepc_solver.cc.

◆ set_which_eigenpairs()

void SolverBase< VectorType >::set_which_eigenpairs ( EPSWhich set_which )

inherited

Indicate which part of the spectrum is to be computed. By default largest magnitude eigenvalues are computed.

Note: For other allowed values see the SLEPc documentation.

Definition at line 138 of file slepc_solver.cc.

◆ set_problem_type()

void SolverBase< VectorType >::set_problem_type ( EPSProblemType set_problem )

inherited

Specify the type of the eigenspectrum problem. This can be used to exploit known symmetries of the matrices that make up the standard/generalized eigenspectrum problem. By default a non-Hermitian problem is assumed.

Note: For other allowed values see the SLEPc documentation.

Definition at line 148 of file slepc_solver.cc.

◆ get_solver_state()

void SolverBase< VectorType >::get_solver_state ( const SolverControl::State state )

inherited

Take the information provided from SLEPc and checks it against deal.II's own SolverControl objects to see if convergence has been reached.

Definition at line 307 of file slepc_solver.cc.

◆ control()

SolverControl & SolverBase< VectorType >::control ( ) const

inherited

Access to the object that controls convergence.

Definition at line 335 of file slepc_solver.cc.

◆ get_eigenpair() [1/2]

void SolverBase< VectorType >::get_eigenpair	(	const unsigned int	index,
		PetscScalar &	eigenvalues,
		PETScWrappers::VectorBase &	eigenvectors
	)

protectedinherited

Access the real parts of solutions for a solved eigenvector problem, pair index solutions, \(\text{index}\,\in\,0\dots \mathrm{n\_converged}-1\).

Definition at line 260 of file slepc_solver.cc.

◆ get_eigenpair() [2/2]

void SolverBase< VectorType >::get_eigenpair	(	const unsigned int	index,
		double &	real_eigenvalues,
		double &	imag_eigenvalues,
		PETScWrappers::VectorBase &	real_eigenvectors,
		PETScWrappers::VectorBase &	imag_eigenvectors
	)

protectedinherited

Access the real and imaginary parts of solutions for a solved eigenvector problem, pair index solutions, \(\text{index}\,\in\,0\dots \mathrm{n\_converged}-1\).

Definition at line 273 of file slepc_solver.cc.

◆ set_matrices() [1/2]

void SolverBase< VectorType >::set_matrices ( const PETScWrappers::MatrixBase & A )

protectedinherited

Initialize solver for the linear system \(Ax=\lambda x\). (Note: this is required before calling solve ())

Definition at line 77 of file slepc_solver.cc.

◆ set_matrices() [2/2]

void SolverBase< VectorType >::set_matrices	(	const PETScWrappers::MatrixBase &	A,
		const PETScWrappers::MatrixBase &	B
	)

protectedinherited

Same as above, but here initialize solver for the linear system \(A x=\lambda B x\).

Definition at line 87 of file slepc_solver.cc.

◆ convergence_test()

int SolverBase< VectorType >::convergence_test	(	EPS	eps,
		PetscScalar	real_eigenvalue,
		PetscScalar	imag_eigenvalue,
		PetscReal	residual_norm,
		PetscReal *	estimated_error,
		void *	solver_control
	)

staticprivateinherited

A function that can be used in SLEPc as a callback to check on convergence.

Note: This function is not used currently.

Definition at line 343 of file slepc_solver.cc.

Member Data Documentation

◆ additional_data

const AdditionalData SLEPcWrappers::SolverJacobiDavidson::additional_data

protected

Store a copy of the flags for this particular solver.

Definition at line 649 of file slepc_solver.h.

◆ solver_control

SolverControl& SLEPcWrappers::SolverBase::solver_control

protectedinherited

Reference to the object that controls convergence of the iterative solver.

Definition at line 297 of file slepc_solver.h.

◆ mpi_communicator

const MPI_Comm SLEPcWrappers::SolverBase::mpi_communicator

protectedinherited

Copy of the MPI communicator object to be used for the solver.

Definition at line 302 of file slepc_solver.h.

◆ eps

EPS SLEPcWrappers::SolverBase::eps

protectedinherited

Objects for Eigenvalue Problem Solver.

Definition at line 354 of file slepc_solver.h.

◆ reason

EPSConvergedReason SLEPcWrappers::SolverBase::reason

privateinherited

Convergence reason.

Definition at line 360 of file slepc_solver.h.

The documentation for this class was generated from the following files:

include/deal.II/lac/slepc_solver.h
source/lac/slepc_solver.cc

Classes

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Static Private Member Functions

Private Attributes

Detailed Description

Constructor & Destructor Documentation

◆ SolverJacobiDavidson()

Member Function Documentation

◆ solve() [1/4]

◆ solve() [2/4]

◆ solve() [3/4]

◆ solve() [4/4]

◆ set_initial_space()

◆ set_transformation()

◆ set_target_eigenvalue()

◆ set_which_eigenpairs()

◆ set_problem_type()

◆ get_solver_state()

◆ control()

◆ get_eigenpair() [1/2]

◆ get_eigenpair() [2/2]

◆ set_matrices() [1/2]

◆ set_matrices() [2/2]

◆ convergence_test()

Member Data Documentation

◆ additional_data

◆ solver_control

◆ mpi_communicator

◆ eps

◆ reason